PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00033.1.g00720.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 334aa    MW: 35454.6 Da    PI: 5.7827
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00033.1.g00720.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.36.3e-14111157354
                                   HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                           HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                   r+h+e+ErrRR+riN  +++Lr+llP+      +K +Ka+ L ++ +++k+L
  Zpz_sc00033.1.g00720.1.am.mk 111 RSHSEAERRRRQRINGHLAKLRSLLPNT-----TKTDKASLLAEVLDHVKEL 157
                                   78*************************9.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.609108157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.42E-13111160No hitNo description
PfamPF000102.4E-11111157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-14112165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.3E-14112164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.9E-13114163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2601.4E-5209256No hitNo description
SuperFamilySSF550216.87E-5209257No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MWDGGVEHGS QEAAHHQLLG PWLGATPFPE PTTVGAFDAA NAGYACDVFG GLGLGHGGVF  60
GFGFDAVQQQ RAADQGSGKA VVSGLLGSLQ AELGRMTPRE MMDAKALAAS RSHSEAERRR  120
RQRINGHLAK LRSLLPNTTK TDKASLLAEV LDHVKELKRQ TSAMMVAATT IPGGEDEAAG  180
PAQMLPTEAD ELAVDAAVGG DGRLVMRASL CCEDRPDLIP DIVRALAALR MRARRAEITT  240
LGGRVRSVLL ITADEGASGH VDGEDDDCRP NALHDDDDER TASHRRHECI ASVQEALRGV  300
MDRRAASSDT SSSGGDGSTK RQRMNYAAQE QCLV
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00033.1.g00720.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001347905.11e-133uncharacterized protein LOC100279487
TrEMBLA0A1D6EPT71e-132A0A1D6EPT7_MAIZE; Transcription factor AIG1
TrEMBLA0A3L6G0U51e-132A0A3L6G0U5_MAIZE; Transcription factor bHLH30
STRINGGRMZM2G176141_P011e-132(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19183898
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.13e-49bHLH family protein