PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00034.1.g00100.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 266aa    MW: 28922.2 Da    PI: 9.8951
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00034.1.g00100.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.12.9e-11133182352
                                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                                   e +r rrk++NRe+ArrsR RK++ ++ L   v +L+ + k+L   l   
  Zpz_sc00034.1.g00100.1.am.mk 133 ENRRKRRKESNRESARRSRIRKQQHLDDLNSQVNQLKDQKKQLGAALRLT 182
                                   5689**************************************98666544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.7E-9128183No hitNo description
SMARTSM003381.0E-11131195IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.668133196IPR004827Basic-leucine zipper domain
PfamPF001704.5E-8133176IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.2E-9135185No hitNo description
CDDcd147027.47E-19136184No hitNo description
PROSITE patternPS000360138153IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MQSVSVDCRC TFGLLWTACC LRPISSEFDS VRQLWQQFPF PLFPSSPARF RCSAVLLSLT  60
HQSLLVHVVV VVVVVMLLLS GPPSSMLGSA ITRLVQSFSV VFLYCGTSSG SSLGTRGSRS  120
SSENAVNLQA QMENRRKRRK ESNRESARRS RIRKQQHLDD LNSQVNQLKD QKKQLGAALR  180
LTSQNLVAVQ AQNSVLQTQK MELESRLGSL TEILLYLNAG ASTGIGPAMN AGILNNGGLA  240
PTGGACDVLG AGAWNQPAAD LYYQCF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135140RKRRKE
2147154RRSRIRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00239DAPTransfer from AT1G75390Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00034.1.g00100.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006660520.17e-57PREDICTED: ocs element-binding factor 1-like
TrEMBLA0A0A9GYA32e-60A0A0A9GYA3_ARUDO; Uncharacterized protein
STRINGOB09G13080.13e-56(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37403276
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.17e-16basic leucine-zipper 44