PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00034.1.g00780.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 370aa    MW: 38260.4 Da    PI: 4.1227
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00034.1.g00780.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY64.32.1e-201652121359
                                   E--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY  13 KevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   K++kgs+fpr+YY+Cts+ +Cp++k+ve+s++dp+++++ Y+geH h+
  Zpz_sc00034.1.g00780.1.sm.mk 165 KPIKGSPFPRGYYKCTSNkDCPARKQVEQSSSDPNTLIVSYTGEHCHS 212
                                   99***************99***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182903.79E-16165214IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.0E-19165214IPR003657WRKY domain
PROSITE profilePS5081122.102165214IPR003657WRKY domain
SMARTSM007743.5E-19165213IPR003657WRKY domain
PfamPF031064.2E-16165211IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MEGDGGWHYG GHGYNNWDLD AVVRLGGGGG NAALEPFQDD PILALLQPQQ DVLPGALPPP  60
QQDVIPDALP QQQQGVLPDA NPWQELQGAM DLPMAADPAF ADLDAFLSDP VFAAPQSPPP  120
PSPRNEAPAP QQAPAAEPPA LGKAAAEPSS DAGAGSSRPK HAYVKPIKGS PFPRGYYKCT  180
SNKDCPARKQ VEQSSSDPNT LIVSYTGEHC HSPPTNRNSR AGIMRSSSRA PIAAGGGGSA  240
SQPAEPQLVL PAPAAAAPPP APPRSVYMDF GKDDDDALAL QALIDDAVLA PENAFLFLNP  300
DYVAPALVNA GGGEGNQPLP IPLENMATDV SRGTGSETDG GQAPIPTNVA MDRFFGSPWE  360
AAWPEAAPGP
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00034.1.g00780.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3493034
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.13e-21WRKY DNA-binding protein 27