PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00039.1.g00570.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 322aa    MW: 34466.3 Da    PI: 10.1242
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00039.1.g00570.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.21.3e-11229289262
                                   XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                                   ke  r +r+ +NR++A+  R+RKka++ eLe k+k Le  N +L +++++l++e  +l++ 
  Zpz_sc00039.1.g00570.1.am.mk 229 KEQNRLKRLLRNRVSAQQARERKKAYLTELEAKAKGLELRNAELEQRVSTLQNENNTLRQI 289
                                   78899***************************************************99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-12228292IPR004827Basic-leucine zipper domain
PfamPF001705.8E-10229290IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.967230293IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.25E-11233290No hitNo description
CDDcd147041.33E-21233283No hitNo description
Gene3DG3DSA:1.20.5.1701.7E-15233292No hitNo description
PROSITE patternPS000360235250IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MAAIGGPDGR VTTGVRSEGW ARGYAFKTSP SDEVEACMVP RHATLPSLWP YDGDAVHGRD  60
GASSKEPHRP PFLRVPPHRL FLSLASRPRL SHLICNLHPP SLPFAVRCPF SRAACSKIWG  120
EREEEMAAQE QEQEKQQAKT SATSSHPTSS ERSSSSAPSN LREGGAESDE ETRRVPEIGS  180
GASASSGAGA DECGAKDDGE PAQQHPAAGT QGPQLPAAGK KRGRAPGDKE QNRLKRLLRN  240
RVSAQQARER KKAYLTELEA KAKGLELRNA ELEQRVSTLQ NENNTLRQIL KNTTAHAGKR  300
AGGGGAGAKG GDGGKKHHFT KS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1218224GKKRGRA
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00039.1.g00570.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008655674.16e-68transcription factor HY5
TrEMBLA0A3L6SSD31e-67A0A3L6SSD3_PANMI; Transcription factor HY5-like
STRINGPavir.Eb00436.1.p2e-70(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP140838111
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.17e-36bZIP family protein