PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00045.1.g00490.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 391aa    MW: 41740.5 Da    PI: 8.505
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00045.1.g00490.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.15.5e-07106161251
                                   HHHHHHHHHHHHHHHHHHHHHHHCTSCCC.............TTS-STCHHHHHHHHHHH CS
                           HLH   2 rrahnerErrRRdriNsafeeLrellPkas..........kapskKlsKaeiLekAveYI 51 
                                   r++  + Er RR+ +++ f+eLr llP  s                 +  +++e++++YI
  Zpz_sc00045.1.g00490.1.am.mk 106 RTSTFMLERARRKLMKENFAELRALLPGVSkkrsddlvlfL----QTNRETTVEETIRYI 161
                                   89999**********************95423333322221....234555566666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474599.77E-10102181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.53E-7103169No hitNo description
PROSITE profilePS5088811.325104164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-8104183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550211.33E-5255313No hitNo description
PROSITE profilePS516718.987260345IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MTQDGHHAGH LQGADGNGTP PPAITREPGS GESSNQASTW TPVPAVAVEV DGSNGKGDDV  60
VPSVHGARLA AGNVDAGTHV MVAEEDVSTK SKGKAPASDG AGKKARTSTF MLERARRKLM  120
KENFAELRAL LPGVSKKRSD DLVLFLQTNR ETTVEETIRY IGVLEDTVKT FEKRKQELAL  180
ERERRQAAAQ PDLGAGPSSA AAPPDAGQVP ILSPVLPQGW CWLPKQQPAA PGAVAEQPRV  240
GFRTWTDSNV VMNVCGDTAF ITVCAAPRPG VLVLLLSVLA KHHIDVLTLE ISSDANRSLF  300
HMCTRTAPPS VEASASQARR PVLICSALSL LRDEAIDKDP DRVPKRRLEL GPFRRPPPSG  360
ALLSCPTVTT TRLARLGSSL SSTLRQMFLE C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1341346RVPKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00045.1.g00490.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2480335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.17e-09bHLH family protein