PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00057.1.g00050.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family HB-other
Protein Properties Length: 98aa    MW: 11124 Da    PI: 8.2607
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00057.1.g00050.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox16.91.1e-0517362948
                                  HHHHHHHHCTS-HHHHHHHH CS
                      Homeobox 29 ereeLAkklgLterqVkvWF 48
                                  er+eL+ +lgLt+rq  +WF
  Zpz_sc00057.1.g00050.1.sm.mk 17 ERTELSLQLGLTDRQLHMWF 36
                                  89****************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000860.001841736No hitNo description
PfamPF071681.5E-96698IPR009834Ureide permease
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0071705Biological Processnitrogen compound transport
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    Send to blast
MDTSHQTERI RIRMRGERTE LSLQLGLTDR QLHMWFYHIQ MGHGRVLFLV CPVLNLDSSK  60
LVAIKQTNKA EVLFPSVGCF LIAAILESLI QSSNAADN
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00057.1.g00050.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-