PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00080.1.g00200.1.sm.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 214aa MW: 23356.8 Da PI: 4.6251

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00080.1.g00200.1.sm.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	25.5	3e-08	18	47	26	55
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 AtPk+i lm+v+++ ++++ HLQk+R Zpz_sc00080.1.g00200.1.sm.mk 18 SATPKKIELLMNVNSIDRKQISAHLQKHRK 47 79**************************95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
TIGRFAMs	TIGR01557	1.3E-7	11	48	IPR006447	Myb domain, plants
Gene3D	G3DSA:1.10.10.60	7.6E-7	17	49	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009736	Biological Process	cytokinin-activated signaling pathway
GO:0005634	Cellular Component	nucleus
GO:0005829	Cellular Component	cytosol
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence Send to blast
MVIAKTTEDV IVVIDEASAT PKKIELLMNV NSIDRKQISA HLQKHRKRMD KELKDSMLLK 60 KAGKNSSSSR RLRKSCEEAV SENNDIQPED RTVTENIIRE TKGRKVYEAM RKALQHGTVF 120 DEQLSDDPSA EEAEQGEAYV MEDSIAQDDA AGPTGGQSAA ESGVTDASSD HNIAEVEPMD 180 NGTNEMQGST GSKAAAQSII NHPNSKVDES PENC

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00080.1.g00200.1.sm.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5920	23	45