PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00120.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 257aa    MW: 27979.8 Da    PI: 10.9639
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00120.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.47.7e-29206255251
                       G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                                   prlrWtp+LH++Fv+a+++LGG++kAtPk++l+lm+v gLt++hvkSHLQ
  Zpz_sc00120.1.g00010.1.am.mk 206 PRLRWTPDLHHCFVHAIHKLGGQDKATPKRVLQLMGVGGLTISHVKSHLQ 255
                                   8************************************************* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.966202257IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.9E-27202255IPR009057Homeodomain-like
SuperFamilySSF466897.17E-14204255IPR009057Homeodomain-like
TIGRFAMsTIGR015574.5E-22206256IPR006447Myb domain, plants
PfamPF002498.2E-9207255IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MAGTHCVWHQ LFISRPCGFL FPARHADLRT RHSDRAYELL IGEQRPCGYH STAAAAAAVP  60
GVLTRRAARD EEGTPKVSAG RRREACAFPC SGRRAGWLAG WATGATSSQS GAQRYMCRAM  120
PGNDDEDGIG SEKTRIHTPG QSQAAHFQAD LRPALSSAPP ASVFLVAERH PVPKIGQSST  180
TMTMARTVVG RERNGGVRQY NRSKVPRLRW TPDLHHCFVH AIHKLGGQDK ATPKRVLQLM  240
GVGGLTISHV KSHLQVN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-16207255452Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-16207255452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-16207255452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-16207255452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-16207255452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-16207255452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-16207255452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-16207255452Protein PHOSPHATE STARVATION RESPONSE 1
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00120.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9569135e-75EU956913.1 Zea mays clone 1577371 mRNA sequence.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.17e-26G2-like family protein