PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00192.1.g00240.1.sm.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 237aa    MW: 26855.6 Da    PI: 9.1228
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00192.1.g00240.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.31.4e-11114155351
                             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                                      +GV++  k+ +W A I++      +k+++lg+ gt +eAa+++++a+ 
  Zpz_sc00192.1.g00240.1.sm.mkhc 114 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQDEAARLYDRAAF 155
                                     79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510328.96689168IPR001471AP2/ERF domain
SMARTSM003803.2E-4113170IPR001471AP2/ERF domain
PfamPF008477.8E-6113156IPR001471AP2/ERF domain
SuperFamilySSF541716.21E-8113158IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.7E-6116160IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MYMLFPYNPD SIAGGISSMV SLRRRRLLGL CSWKDSLPVD LPKPIDDVEP VHSNAKPFSV  60
HPLPSTEICN VLVDSPSGMD SFKEERKQYY PGKEIKRRKR HRRKQYVDQE PCIMRGVYFK  120
NMKWQAAIKV DKKQIHLGTV GTQDEAARLY DRAAFMCGRE PNFELSEEVK QELQKYTWEE  180
FLAKTRNAIT SKKQRKAGLL RCSKAELVMG QSDGDTEMIN GGGSSNSDSG DAENSAA
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00192.1.g00240.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001151501.11e-120uncharacterized protein LOC100285135
TrEMBLA0A1E5W7K41e-119A0A1E5W7K4_9POAL; Ethylene-responsive transcription factor-like protein
STRINGPavir.Aa01947.1.p1e-117(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75163545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.23e-46ERF family protein