PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00197.1.g00220.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 176aa    MW: 19179.7 Da    PI: 8.2308
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00197.1.g00220.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.12.2e-123683149
                           NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
                                  lppGf+F P+de+lvv++L++k+++ +++  ++i++v +++++Pw+L++
  Zpz_sc00197.1.g00220.1.am.mk 36 LPPGFHFFPSDEDLVVHFLRRKAANVPCRP-DIIPTVLLHRYDPWELNA 83
                                  79*************************999.99**************73 PP
2NAM45.72.1e-148413774128
                           NAM  74 knratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   + r+  sg W++ g d++v++ +g  vglkkt++f +g+  kg kt+Wvmhey+l
  Zpz_sc00197.1.g00220.1.am.mk  84 QGRTSPSGCWNTIGADETVTC-SGCSVGLKKTFIFCTGEPFKGFKTNWVMHEYHL 137
                                   568889***************.9999***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-3631144IPR003441NAC domain
PROSITE profilePS5100515.65336170IPR003441NAC domain
PfamPF023651.8E-1637137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MRKANPKGGG WLGLETGWGS DEGRADHIRM GGATNLPPGF HFFPSDEDLV VHFLRRKAAN  60
VPCRPDIIPT VLLHRYDPWE LNAQGRTSPS GCWNTIGADE TVTCSGCSVG LKKTFIFCTG  120
EPFKGFKTNW VMHEYHLLDG GGYNASGGST SSSSSVQQLG DMPSLRIKLR RASELP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-243514616151NO APICAL MERISTEM PROTEIN
1ut4_B6e-243514616151NO APICAL MERISTEM PROTEIN
1ut7_A6e-243514616151NO APICAL MERISTEM PROTEIN
1ut7_B6e-243514616151NO APICAL MERISTEM PROTEIN
3swm_A6e-243514619154NAC domain-containing protein 19
3swm_B6e-243514619154NAC domain-containing protein 19
3swm_C6e-243514619154NAC domain-containing protein 19
3swm_D6e-243514619154NAC domain-containing protein 19
3swp_A6e-243514619154NAC domain-containing protein 19
3swp_B6e-243514619154NAC domain-containing protein 19
3swp_C6e-243514619154NAC domain-containing protein 19
3swp_D6e-243514619154NAC domain-containing protein 19
4dul_A6e-243514616151NAC domain-containing protein 19
4dul_B6e-243514616151NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00197.1.g00220.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021314570.19e-67NAC domain-containing protein 104 isoform X2
TrEMBLA0A0A9FYS54e-66A0A0A9FYS5_ARUDO; Uncharacterized protein
STRINGSi018368m3e-64(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36673679
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.17e-30xylem NAC domain 1