PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00200.1.g00440.1.sm.mkhc

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 300aa MW: 33394.7 Da PI: 8.4498

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00200.1.g00440.1.sm.mkhc	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46	1.2e-14	234	276	5	47
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r++kNRe+A rsR+RK+a++ eLe+kv L++eN++Lk Zpz_sc00200.1.g00440.1.sm.mkhc 234 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLQEENERLKR 276 79*************************************9995 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.5E-8	230	287	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.611	232	277	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.5E-12	234	276	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.8E-14	234	278	No hit	No description
SuperFamily	SSF57959	2.19E-11	234	281	No hit	No description
CDD	cd14707	1.62E-24	234	279	No hit	No description
PROSITE pattern	PS00036	0	237	252	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence Send to blast
MQRLARQGSL YNLTLDEVQS HLGEPLHSMN LDELLKSVFP DGLDPDGATT SEHEQASGLL 60 RQASISMPPE LSKKTVDEVW KGIQDGPKRN AEEGSLRRRE RQPTLGEMTL EDFLVKAGVV 120 TEGYLKDLND VGNVDQVGMA GAAGLTRGAQ WLDQYQQQFT AIDAHQHGQH SIPGAYMLSR 180 LALQPLNVVP SAIVESAYSD GNITSPMMGT LSDSPTPVRK RGATGDVADK LMERRQKRMI 240 KNRESAARSR ARKQAYTNEL ENKVSRLQEE NERLKRQKHS IIRIVINDGP KGREHCPLRI

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00200.1.g00440.1.sm.mkhc

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025818579.1	1e-170	ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2
Swissprot	Q9LES3	5e-66	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A0A9HCS1	1e-169	A0A0A9HCS1_ARUDO; Uncharacterized protein
STRING	Pavir.Eb03523.1.p	1e-169	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2707	38	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	2e-68	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]