PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00210.1.g00460.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 171aa    MW: 18521.6 Da    PI: 5.7998
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00210.1.g00460.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like315.7e-101203655
                       G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                                  m+vk+Ltl+hvkSHLQ+YR+
  Zpz_sc00210.1.g00460.1.am.mk  1 MDVKDLTLAHVKSHLQMYRT 20
                                  9******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.6E-8121IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MDVKDLTLAH VKSHLQMYRT VKNTERPATS LDQADGFENG SAGEICDDNS VDLHGYGGGG  60
RPETAPRHGR LAASAACNDH GSGTDAHACC PMELLRKVVT MTPSLALCLE DWTSLPNTGS  120
IQSLKDHQIQ QSKSLEILSD MNSCVSETTT SITSDLNLEF TLGRPHQNRR N
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00210.1.g00460.1.am.mk
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9570082e-55EU957008.1 Zea mays clone 1580405 KANADI-like transcription factor FEATHERED mRNA, complete cds.
GenBankKJ7268192e-55KJ726819.1 Zea mays clone pUT3358 G2-like transcription factor (GLK55) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025821359.19e-67probable transcription factor RL9 isoform X1
TrEMBLA0A3L6RHT41e-66A0A3L6RHT4_PANMI; Putative transcription factor RL9 isoform X1
STRINGPavir.Fa01877.1.p6e-68(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47213665
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.18e-16G2-like family protein