PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00228.1.g00250.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 122aa    MW: 13687.4 Da    PI: 8.7951
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00228.1.g00250.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY46.11e-1445812359
                                  EEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY 23 sYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                                  +YYrC+  gC+vkk+ve++ ed+++v++tY g Hnh 
  Zpz_sc00228.1.g00250.1.sm.mk 45 NYYRCSADGCSVKKRVEQDCEDTRYVITTYDGVHNHA 81
                                  6***********************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182907.19E-133283IPR003657WRKY domain
SMARTSM007745.2E-83982IPR003657WRKY domain
PfamPF031063.3E-104580IPR003657WRKY domain
Gene3DG3DSA:2.20.25.808.2E-134583IPR003657WRKY domain
PROSITE profilePS5081116.0994583IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    Send to blast
MHLRKHLPLL KPLRYAGDEK GARVDGRIRF RTRSEMEILD DGFWNYYRCS ADGCSVKKRV  60
EQDCEDTRYV ITTYDGVHNH ASPAAATIMQ YGGGTRAHGF YSLPHNGSPL AATSYSSGSL  120
LF
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00228.1.g00250.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKU0586091e-43KU058609.1 UNVERIFIED: Panicum miliaceum WRKY15-like gene, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002440727.13e-39probable WRKY transcription factor 50
TrEMBLA0A1E5VP701e-38A0A1E5VP70_9POAL; Putative WRKY transcription factor 50
TrEMBLB6T4Y91e-38B6T4Y9_MAIZE; WRKY67-superfamily of TFs having WRKY and zinc finger domains
STRINGSb09g005700.11e-38(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4430833
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.12e-22WRKY DNA-binding protein 50