PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00242.1.g00230.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 251aa    MW: 26408.6 Da    PI: 5.1188
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00242.1.g00230.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.44.1e-09130150223
                           AP2   2 gykGVrwdkkrgrWvAeIrdps 23 
                                   +y+GVr+++ +g+W+AeIrdp 
  Zpz_sc00242.1.g00230.1.am.mk 130 KYRGVRRRP-WGKWAAEIRDPQ 150
                                   8********.**********84 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.8E-10129154IPR001471AP2/ERF domain
SuperFamilySSF541714.9E-6130154IPR016177DNA-binding domain
PfamPF008472.9E-4130150IPR001471AP2/ERF domain
SMARTSM003800.0026130167IPR001471AP2/ERF domain
PROSITE profilePS5103211.403130154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MFLPGEEEES KRNSSAHSSR EAEQLASVFA LLPLAGLIQV TFVLMLVLTP CERAHAVMCE  60
QSKSKTSMGC SEQALAVENA VIVSALTHVV ANGRAPAPEL PMPWAADSGG VVAQGQQQQG  120
QLHAPAPARK YRGVRRRPWG KWAAEIRDPQ KAARAAGDVM DYLEYSRILE ADDEPSAIVD  180
GLLGGDGNGR FLGSWSIGTS PPSSSASGAG SATPLFPGCS GGKQSSSSPF GEKGVAEEFL  240
FHSGDENNCQ L
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00242.1.g00230.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A3L6QA865e-26A0A3L6QA86_PANMI; Uncharacterized protein
STRINGGRMZM2G175525_P015e-24(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP142992022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07310.12e-11ERF family protein