PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00259.1.g00410.1.es.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family CAMTA
Protein Properties Length: 655aa    MW: 73674.9 Da    PI: 5.0982
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00259.1.g00410.1.es.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1178.86.6e-5661212116
                            CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggve 79 
                                     lke ++rwl++ ei++iL+n+++++++ e+++rp+sgsl+L++rk++ryfrkDG++w+kk+dgktv+E+he+LK g+v+
  Zpz_sc00259.1.g00410.1.es.mkhc   6 LKEaQHRWLRPAEICEILKNYRNFQIAPEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKRDGKTVKEAHERLKSGSVD 84 
                                     45559************************************************************************** PP

                            CG-1  80 vlycyYahseenptfqrrcywlLeeelekivlvhyle 116
                                     vl+cyYah+een++fqrr+yw+Lee++ +ivlvhyle
  Zpz_sc00259.1.g00410.1.es.mkhc  85 VLHCYYAHGEENENFQRRSYWMLEEDFMHIVLVHYLE 121
                                     ***********************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143783.2782128IPR005559CG-1 DNA-binding domain
SMARTSM010761.6E-775123IPR005559CG-1 DNA-binding domain
PfamPF038595.8E-508121IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.9E-4431515IPR013783Immunoglobulin-like fold
SuperFamilySSF812961.07E-15431516IPR014756Immunoglobulin E-set
PfamPF018337.5E-6436508IPR002909IPT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 655 aa     Download sequence    Send to blast
DVQQILKEAQ HRWLRPAEIC EILKNYRNFQ IAPEPPNRPP SGSLFLFDRK VLRYFRKDGH  60
NWRKKRDGKT VKEAHERLKS GSVDVLHCYY AHGEENENFQ RRSYWMLEED FMHIVLVHYL  120
ELKGGKSSSR IRHDNMLQAS HTDNPLSHLP SQTTEGESSL SGQASEYEET ELDIYSGGTG  180
YNPFSWMQQH ENGGGPVIGS SILSSYIPEP SASYQQGLPA MTANTSFYSH GEDHLAVFRD  240
VSCQIAFNGA DSQMNLSSLN GVTKPDNGIH HMSLPQVSIQ REQIPFTEGP GIESFTFDEV  300
YSNELSVKDA DGAGTDEGSL WQLSGLGGSF FTEDNFQQNQ RSWEKAINYP LLKSQSSNLS  360
DILKDSFKKS DIFTRWMTKE LGEVDDSQIS SSSGVNWNNE DADTIIEATS HDQLDQFTVG  420
PVLAQDQLFS IFDFAPGWTY AGSKTSVLIA GRFLNPNEVK SCKWSCMFGE VEVPAHITAD  480
ETLGCYSPSH KPGRVPFYVT CSNRLACSEV REFEFRPITS QYMDAPSPHG ATNKTYLQTR  540
LDKLVSLRQD EYHAVVGNPT KERIDLSKKI NSLIMDNDKW SESLKLAGDY EISTDDKQDQ  600
LFENCINEKM HIWLVHKAGS NGKGPSVLDD EGQGVLHLAA ALGYDWVIRP TITVV
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00259.1.g00410.1.es.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004985393.10.0calmodulin-binding transcription activator 3 isoform X2
TrEMBLA0A368SUT70.0A0A368SUT7_SETIT; Uncharacterized protein
STRINGGRMZM2G447551_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60838140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.21e-144signal responsive 1