PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00267.1.g00240.1.sm.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 220aa    MW: 23292.4 Da    PI: 10.0753
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00267.1.g00240.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.51.5e-081311732163
                                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1  21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                     R RKk+++ e ++ v +L+ eN+aL++e++ l+k + +l +e+
  Zpz_sc00267.1.g00240.1.sm.mkhc 131 RPRKKMRLPEIQQMVRSLSVENDALRQEMKALQKACTALSKEN 173
                                     89*************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.5E-5131170No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MTAAVDAEIS AVVATAADII CSLRAADLAG WTPPWRKPDP SARDDDGDAR EQPVGLPAAV  60
ARGKRSRSRR GSPSAGGEDG AICSPPPPVV SSSAGGAGVV LHVEPVNSSK VGHSGRRSIL  120
PVPPARPAGQ RPRKKMRLPE IQQMVRSLSV ENDALRQEMK ALQKACTALS KENGKLETRL  180
DQSNKREEKR GKPQPDQCAA KQEVQNGFAL PDLNLPAHDA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16368KRSRSR
2130136RPRKKMR
3184191KREEKRGK
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00267.1.g00240.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0980021e-66FP098002.1 Phyllostachys edulis cDNA clone: bphyem125k10, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025811831.12e-70collagen alpha-1(I) chain-like
TrEMBLA0A3L6PC006e-71A0A3L6PC00_PANMI; Uncharacterized protein
STRINGOB06G30390.11e-55(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37902951