PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00271.1.g00050.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 153aa    MW: 17661.2 Da    PI: 4.6326
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00271.1.g00050.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.11.1e-1253599129
                           NAM  99 lvglkktLvfykgrapkgektdWvmheyrle 129
                                   +vg+kktLvfy gr+p gekt+W+mheyrle
  Zpz_sc00271.1.g00050.1.sm.mk   5 VVGMKKTLVFYIGRSPWGEKTEWIMHEYRLE 35 
                                   69***************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.595162IPR003441NAC domain
SuperFamilySSF1019416.28E-17462IPR003441NAC domain
PfamPF023652.8E-6634IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MMPAVVGMKK TLVFYIGRSP WGEKTEWIMH EYRLEGSGKF CCPSSSSNIS KAEWVVCRVF  60
HKSLRNMDMH MLPYEEAIAN TNTYQSSMSF STSMQFLLEP EDFSIELSAL YPDMDMTMPF  120
YSTIDASSSV APSIAFFEEQ RFRVSEMQVQ TEY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-11563111169Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00271.1.g00050.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1E5V4C42e-29A0A1E5V4C4_9POAL; NAC domain-containing protein 79
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3620734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18270.22e-19Arabidopsis NAC domain containing protein 87