PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00301.1.g00220.1.sm.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 178aa    MW: 20120.8 Da    PI: 7.5028
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00301.1.g00220.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like44.82.8e-1441682855
                         G2-like 28 tPktilelmkvkgLtlehvkSHLQkYRl 55
                                     Pk+il+lm+v+gLt+e+v+SHLQkYRl
  Zpz_sc00301.1.g00220.1.sm.mkhc 41 GPKKILDLMNVPGLTRENVASHLQKYRL 68
                                    6**************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521724.98E-5938IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23003.0E-61238No hitNo description
SuperFamilySSF466891.06E-83072IPR009057Homeodomain-like
TIGRFAMsTIGR015573.2E-123668IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.606.9E-153973IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MALADATAFP YGLRVLVVDD DPTWLKILEK MLRKCSYEEV GPKKILDLMN VPGLTRENVA  60
SHLQKYRLYL SRLQKQNEER AMGSTRQDFS YKGPSDNLNL RSSFQEQPGN IASGYQNGSQ  120
KIQNQINMTD SHLEDKKVVV PLHVPDKSRT PVSDVTNSQN VTGRFLQSTA DCEVISFE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00301.1.g00220.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025817738.16e-65two-component response regulator ORR26
SwissprotQ5N6V81e-59ORR26_ORYSJ; Two-component response regulator ORR26
TrEMBLA0A1E5VJT11e-84A0A1E5VJT1_9POAL; Two-component response regulator ORR26
STRINGPavir.Ea03527.1.p1e-63(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP59003752
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.12e-17response regulator 11
Publications ? help Back to Top
  1. Du L, et al.
    The two-component signal system in rice (Oryza sativa L.): a genome-wide study of cytokinin signal perception and transduction.
    Genomics, 2007. 89(6): p. 697-707
    [PMID:17408920]