PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00341.1.g00300.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 181aa    MW: 19320.3 Da    PI: 9.7972
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00341.1.g00300.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.66.2e-057590318
                                  HHHHHHHHHHHHHHHH CS
                           HLH  3 rahnerErrRRdriNs 18
                                  ++h ++ErrRR+++N+
  Zpz_sc00341.1.g00300.1.sm.mk 75 AKHTMVERRRRKKLND 90
                                  58*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.52E-474102No hitNo description
Gene3DG3DSA:4.10.280.109.5E-47591IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MDEGNSAPPP PTTMDAIWPD GMAGDSFPAF PFPSDILFAR SMGVKASLEN AAGVAAAEGG  60
VGAGGSGTDK KGMQAKHTMV ERRRRKKLND GSVVPKITKI EVRMTEGDAV NIRMFCARKP  120
GILPSIVWAL DRLGLDVQQG VISSFDKFVM DIFRAERRSM DGPGLVPKDI KSALMQSAGL  180
Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18087ERRRRKKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00341.1.g00300.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021673396.15e-37transcription factor ICE1-like isoform X2
TrEMBLA0A0D2TAJ06e-31A0A0D2TAJ0_GOSRA; Uncharacterized protein
TrEMBLR4HBX86e-31R4HBX8_9ROSI; ICEII transcription factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP7068122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12860.14e-24bHLH family protein