PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00363.1.g00080.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 275aa    MW: 28113.1 Da    PI: 10.1538
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00363.1.g00080.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.40.00029255272219
                                   HHHHHHHHHHHHHHHHHH CS
                           HLH   2 rrahnerErrRRdriNsa 19 
                                   r +h++ E+rRR +iN++
  Zpz_sc00363.1.g00080.1.am.mk 255 RSKHSATEQRRRTKINDR 272
                                   889*************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.8E-4251272IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MEAGQAAREA HRKSVSSFVP PKPFSIVGLS IGAPASSSSS SSYGCACLAL AQFIITFLFA  60
AITGAREGDL SVPVPSLPMQ LFQGEKPAHD FLSLHTGGGA SSPVQDRSTQ ANPTHVASNA  120
AAACDLGVHN GLKPLKLGKP QRGGGAIAMA SSGLEADDSE EHVLPGGVGT FSIRQVASGQ  180
SRGEAASHGG VRAAFVPGLH GSGTEGAHGA DSGARAAHSG PSTMWRDSGT DQRSRTTREG  240
RSSGSSADQG PNTPRSKHSA TEQRRRTKIN DRQAR
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00363.1.g00080.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001146169.27e-63uncharacterized protein LOC100279738
TrEMBLA0A3L6RRF88e-68A0A3L6RRF8_PANMI; Transcription factor BIM2-like isoform X2
STRINGGRMZM2G317450_P033e-62(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76237128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08130.13e-08bHLH family protein