PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00363.1.g00140.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 132aa    MW: 15536.3 Da    PI: 8.5251
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00363.1.g00140.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.31.6e-1342101463
                                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                    +r rr+++NRe+ArrsR RK++++ eL   v  L + N++L ++l++    ++++  e+
  Zpz_sc00363.1.g00140.1.am.mk  42 ERRRRRMISNRESARRSRMRKQKQLSELWAQVVHLRSTNRQLLDQLNHVIRDCERVLHEN 101
                                   6899*********************************************99999988876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.4E-113996No hitNo description
SMARTSM003381.2E-1439103IPR004827Basic-leucine zipper domain
PfamPF001702.7E-104196IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.70341104IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.44E-124393No hitNo description
PROSITE patternPS0003604661IPR004827Basic-leucine zipper domain
CDDcd147021.92E-124888No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MLAPHPTSYQ DVAQLVHEAS FHVGNKSNSD ESDDYQRSLA EERRRRRMIS NRESARRSRM  60
RKQKQLSELW AQVVHLRSTN RQLLDQLNHV IRDCERVLHE NSQLRDEQTK LQKQLEKLPE  120
VTTEASDMGT DS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14263RRRRRMISNRESARRSRMRKQK
25562RRSRMRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00647PBMTransfer from LOC_Os02g49560Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00363.1.g00140.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2890274e-96AK289027.1 Oryza sativa Japonica Group cDNA, clone: J090090L02, full insert sequence.
GenBankAP0052844e-96AP005284.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:B1121A12.
GenBankAP0149584e-96AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence.
GenBankCP0126104e-96CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004953778.11e-76basic leucine zipper 8
TrEMBLA0A3L6RPG12e-76A0A3L6RPG1_PANMI; Basic leucine zipper 43
STRINGSi019897m4e-76(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118635126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G38800.19e-15basic leucine-zipper 43