PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00364.1.g00060.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 235aa    MW: 25935.4 Da    PI: 9.6564
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00364.1.g00060.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM113.42.4e-35151431128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   l+pG++F+Ptd++lvv+yL+ ++ + +l+   +i++ di++++P+dL     ++ +e +fF +r  ++++++r +r++k+g
  Zpz_sc00364.1.g00060.1.sm.mk  15 LAPGYKFNPTDQDLVVRYLRCRAVNYQLSS-AIIADKDILDHHPSDLV---PETGSEKFFFYRRVLRSENDTRWKRTAKHG 91 
                                   579************************999.78**************5...34567999********************** PP

                           NAM  82 yWkatgkdkevlsk..kgel.....vglkktLvfykgrapkgektdWvmheyrl 128
                                   yW+a+gk+ +++++  +        vg+k+tLvfy+g+ p+ge+tdWvm ey l
  Zpz_sc00364.1.g00060.1.sm.mk  92 YWRASGKEVPIFCTsvS--SgvplmVGIKRTLVFYHGKPPSGERTDWVMREYCL 143
                                   *************7441..356788***************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.1E-3612149IPR003441NAC domain
PROSITE profilePS5100535.72915159IPR003441NAC domain
PfamPF023651.6E-1817143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MAASIPLASG VTIPLAPGYK FNPTDQDLVV RYLRCRAVNY QLSSAIIADK DILDHHPSDL  60
VPETGSEKFF FYRRVLRSEN DTRWKRTAKH GYWRASGKEV PIFCTSVSSG VPLMVGIKRT  120
LVFYHGKPPS GERTDWVMRE YCLAGGGLSP YRMMRPCMKN NSGHINGTVK VTSKARKPTI  180
IIRANNNAGV EKIRFYDFLG QGNHDDGTAS SSATPMENSE VKGGSSENAS TEDGI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-221514315140Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00364.1.g00060.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A3L6PYX23e-61A0A3L6PYX2_PANMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44822369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-29NAC domain containing protein 83