PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00369.1.g00020.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 629aa    MW: 69094.1 Da    PI: 9.9744
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00369.1.g00020.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM48.92.2e-15541944128
                           NAM   4 GfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkya. 69 
                                    f F P++  l+++yL+kk++g +    l  +  +++ d++++ P  L +          + +++ ++ yfF+k++   + 
  Zpz_sc00369.1.g00020.1.am.mk  54 SFSFCPSNALLINHYLRKKIDGADvfsnLANAAYFHDEDVCSAPPDVLVRahtmparvpsREAGDGHQFYFFTKARFIGNk 134
                                   589*********************8765333345**************744667776654222355577888888754441 PP

                           NAM  70 ..tgkrknratk.sgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128
                                     + +r+ + t  + +W+a g+ k+v     ++ g  + L ++ ++ pk  ek  W+m ey++
  Zpz_sc00369.1.g00020.1.am.mk 135 lnNRSRTIKNTGdKETWHAEGSAKPVDG---TADGYMTKLSYHVKTGPKtVEKPGWIMTEYSF 194
                                   1145555553434778*********965...67899999****66555515799*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.81951210IPR003441NAC domain
SuperFamilySSF1019411.57E-2251210IPR003441NAC domain
PfamPF023651.7E-1155193IPR003441NAC domain
PfamPF113213.5E-18483620IPR021470Protein of unknown function DUF3123
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 629 aa     Download sequence    Send to blast
MIDFGRTDRI TDYTHEPHAT DSSNSPPSPS IFLSTVSSNS PPTRPIEMAA MDDSFSFCPS  60
NALLINHYLR KKIDGADVFS NLANAAYFHD EDVCSAPPDV LVRAHTMPAR VPSREAGDGH  120
QFYFFTKARF IGNKLNNRSR TIKNTGDKET WHAEGSAKPV DGTADGYMTK LSYHVKTGPK  180
TVEKPGWIMT EYSFKDTKEG DLVLCKVYKS PRGPGRSKAP SSPPAMSDRK RKAADDLEEA  240
TPSTRPRQNN ENHQHAAVPE FGAERSQTQA MPASSNSNSA LEDIDWSWFM PESEAERSQP  300
HLAKPASSGS NVTLEDIQLY AKLLLADYLR FAACHGDLSR LCPSAATHSI CHEFPRRKST  360
KRPVDKKPSA SPLVRTYDKV LKPCPHSLKE NPSPRKTSMV RLDSAGSINL PPPKRPRHDA  420
SRHASHARPR HPRSASLGVT PRPPVACSPP TKRPRSGYSS ARTTCGAAAS TAAHLILKPG  480
TRVIVRTRTE GMIDGKILVL WLPAMVVSAT DGSYEVIYEG KLSRNDSFSC VHVPIKASVD  540
PAIASGGGDR PMDPKPAVAE EAHAKIEDSR KPKTSARAES EVGKCKKPLY LRRDHAAETK  600
PAPRPTTAGK SIKVIRKIMS EKDRQDRYY
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00369.1.g00020.1.am.mk
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27300.15e-08NTM1-like 8