PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00379.1.g00150.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 324aa    MW: 35782 Da    PI: 6.4187
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00379.1.g00150.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY64.61.6e-20121182259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE...-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkver...saedpkvveitYegeHnhe 59 
                                   +Dgy+WrKYGqK++++  f+r YY+C    +Cp+kkkv++   s++d  ++e+tY ++H+++
  Zpz_sc00379.1.g00150.1.am.mk 121 KDGYQWRKYGQKNIQNCSFARYYYKCNGDrRCPAKKKVQQqdgSSDDVPMFEVTYVNDHTCH 182
                                   7*************************9988********98333568999***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.0E-22105183IPR003657WRKY domain
PROSITE profilePS5081115.009115179IPR003657WRKY domain
SuperFamilySSF1182901.57E-19117182IPR003657WRKY domain
SMARTSM007745.1E-25120183IPR003657WRKY domain
PfamPF031061.8E-21121182IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MAFDPVTKLS DVLTGGYHLN SRLQALLGSP LDFRRQEEAK AFSQELSRVF MVSLSMLKQT  60
DDSKRTLNDM APVIRTGDSF GFCTLAKERV TISREGVTSH KNSTREQEFT RKEITSTPHS  120
KDGYQWRKYG QKNIQNCSFA RYYYKCNGDR RCPAKKKVQQ QDGSSDDVPM FEVTYVNDHT  180
CHHVDDGSSQ KSLPQTTTTG QQRSGFEAAA NRNSVALFDP LHRVGSAEEN EAIVSCLATV  240
ISGTGPSSPG AEPVAPPVYL PQSIAGASMV ADGAMAMLEL DTGFSWDHPS SPLCPAEVIM  300
GFRDDVHLVD AARFGDTVWP QYYT
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00379.1.g00150.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004972234.12e-87WRKY transcription factor WRKY62
TrEMBLA0A3L6SIS79e-91A0A3L6SIS7_PANMI; Uncharacterized protein
STRINGSi003782m6e-87(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132432632
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66560.11e-13WRKY DNA-binding protein 64