PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00388.1.g00170.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 136aa    MW: 15528.5 Da    PI: 5.9781
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00388.1.g00170.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM49.61.3e-15121362125
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknratks 80 
                                   ppG+ F+Ptd+el+++yL ++  gk+ +l+++ +++ ++ +++P++L +++  +++  ++f+++ ++  a   r+     +
  Zpz_sc00388.1.g00170.1.sm.mk  12 PPGLIFDPTDKELIWHYLLPQSLGKPETLSSFvVEDNKVANTQPRKLFQNHGLSDNlPTFFYVCDERPDA--CRNCLCDGN 90 
                                   8*************************88877658888**********75555555547799999888654..58888889* PP

                           NAM  81 gyWkatgk....dkevlsk.kgelvglkktLvfykgrapkgektdWvmhe 125
                                   g Wk +      d +vl   ++++ ++++ L f      +  + +Wvmhe
  Zpz_sc00388.1.g00170.1.sm.mk  91 GLWKIQKCeskdDPHVLIVgGTNVRWTRNNLNFNLD---S-GSFSWVMHE 136
                                   ****5543111133444445777899*******832...3.3679****8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-197136IPR003441NAC domain
PROSITE profilePS5100517.68811136IPR003441NAC domain
PfamPF023651.7E-1112136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MSAAKFFSDN HPPGLIFDPT DKELIWHYLL PQSLGKPETL SSFVVEDNKV ANTQPRKLFQ  60
NHGLSDNLPT FFYVCDERPD ACRNCLCDGN GLWKIQKCES KDDPHVLIVG GTNVRWTRNN  120
LNFNLDSGSF SWVMHE
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00388.1.g00170.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP8717946