PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00423.1.g00340.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 282aa    MW: 28963.3 Da    PI: 11.6814
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00423.1.g00340.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like391.7e-12248276230
                       G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPk 30 
                                   pr+rWt++LH+rFv+ave LGG+e+  P 
  Zpz_sc00423.1.g00340.1.am.mk 248 PRMRWTSTLHSRFVHAVELLGGHERESPP 276
                                   9***********************99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.7E-8246275IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MEAAASAPDL SLHISLPSSN NAASPSSSGL GLGGGGAGGR GPVAGEDPWR RLNGSTASTE  60
LSLSPPPPLR QEGGTGALPW RLRPTAANSP SSSSSASSAG AAFLPVPVPR LSLDAAASAE  120
AARARPINGV PVYSSPAAGS PFLGAGDYRQ RHAKVGLYNP YPSSAWPASL RSTTAAAPAS  180
VDTTATAAFL SPSAYNRMLS GTGRLHLHGA FADTLRGYGG RHQHFGGSLA SSRYMPRLPA  240
SRRGMRAPRM RWTSTLHSRF VHAVELLGGH ERESPPQLGF SL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that regulates abaxial identity during leaf development. {ECO:0000269|PubMed:18594992}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00423.1.g00340.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025820100.12e-96probable transcription factor RL9 isoform X2
SwissprotQ0J2351e-35ROLL9_ORYSJ; Probable transcription factor RL9
TrEMBLA0A3L6RKZ81e-102A0A3L6RKZ8_PANMI; Putative transcription factor RL9
STRINGPavir.Fb00812.1.p6e-96(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25583787
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.16e-19G2-like family protein