PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00452.1.g00020.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GeBP
Protein Properties Length: 291aa    MW: 31393.1 Da    PI: 7.3254
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00452.1.g00020.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57354.24.1e-1780168397
                        DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfsk 82 
                                   +q+lws+ De++lL G   fk + g+ p   d+ ++yef+k+sis +  k  +  K++rLK Kf++           + s+
  Zpz_sc00452.1.g00020.1.sm.mk  80 AQKLWSDADEVALLTGAAAFKGRSGVAPRLpDMGELYEFLKDSISPHLDKAKVYYKLKRLKSKFQHSAPG-------ASST 153
                                   79************************98877**********************************99888.......7899 PP

                        DUF573  83 ehdqkifelskkiWg 97 
                                   +hd+ + +ls  +Wg
  Zpz_sc00452.1.g00020.1.sm.mk 154 PHDRLVRDLSADLWG 168
                                   999999999999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.3E-1681168IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MPSKRPSPHA VDEAAAAAAR LDAASPRASN SRRRAPAGLG AAARKSDRKR KPRAFPDSTT  60
LAAVTAVAAA PSASSSRGAA QKLWSDADEV ALLTGAAAFK GRSGVAPRLP DMGELYEFLK  120
DSISPHLDKA KVYYKLKRLK SKFQHSAPGA SSTPHDRLVR DLSADLWGAE LAHQVEEGER  180
PEEDGADDEE AEGVNAIQVH TGGDSEGPQP ERLPIVREVL GEHWRLNRQA LSGVSLEKGL  240
LQVAPEKADA AEAKWRQQLE ADMRMQMRWH DLGKEAGQPN LPFIADADRQ T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13150RRRAPAGLGAAARKSDRKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00452.1.g00020.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002436676.23e-86STOREKEEPER protein
TrEMBLA0A0A9JI197e-91A0A0A9JI19_ARUDO; Uncharacterized protein
STRINGGRMZM2G008558_P023e-85(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26822763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.16e-09DNA-binding storekeeper protein-related transcriptional regulator