PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00499.1.g00050.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GeBP
Protein Properties Length: 335aa    MW: 36483.7 Da    PI: 9.8411
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00499.1.g00050.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57352.81.1e-16134222397
                        DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfsk 82 
                                   +q+lw++ De++lL+G   fk++ g+ p   d+ ++y f+++ is +  +  +  K++rLK Kf++           + s+
  Zpz_sc00499.1.g00050.1.am.mk 134 AQKLWTDADEVALLRGAAAFKERSGVAPRLpDMGDLYAFIRDTISPDLDQARVYYKLKRLKSKFQRSAPG-------ASST 207
                                   79************************98877*********************************999888.......7788 PP

                        DUF573  83 ehdqkifelskkiWg 97 
                                    hd+ + +ls+ +Wg
  Zpz_sc00499.1.g00050.1.am.mk 208 VHDRLVRDLSSDLWG 222
                                   999999999999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.8E-15135222IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MFSLRERRRS ICSCLADKEI LAWMLAERRR LSPPPRGAPP MPSKRPSPHA VDEAAAAAAR  60
LDAASPRAKS RVXXRRSPNP NPSSRHRAPG LGPASASGKS DRRSKPRSFA DSTTLAAAAA  120
AAAAVPASWS RGAAQKLWTD ADEVALLRGA AAFKERSGVA PRLPDMGDLY AFIRDTISPD  180
LDQARVYYKL KRLKSKFQRS APGASSTVHD RLVRDLSSDL WGSELAHRGE DGERAEDDGA  240
DVEEAEGVNA IQVHEPGRLP IVREVLGEYW RLNGQALSGV SLEKGLSLVT PDEADVAEAN  300
WRRQLVADMR MQMHWHDLAN EVYGLLMDAI KGLGP
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00499.1.g00050.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002436676.24e-97STOREKEEPER protein
TrEMBLA0A0A9EWQ22e-98A0A0A9EWQ2_ARUDO; Uncharacterized protein
STRINGGRMZM2G008558_P021e-95(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26822763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.11e-08DNA-binding storekeeper protein-related transcriptional regulator