PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00505.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 442aa    MW: 46209.9 Da    PI: 11.3059
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00505.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY941.1e-29372430259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +D+++WrKYGqK++kgs+fpr+YYrC+   gCp++k+ver+a+dp ++++tYeg+H+h+
  Zpz_sc00505.1.g00010.1.am.mk 372 SDEHSWRKYGQKPIKGSPFPRGYYRCSAVkGCPARKHVERDASDPATLVVTYEGDHRHD 430
                                   69*************************988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.3E-5334365IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.806.4E-31358431IPR003657WRKY domain
PROSITE profilePS5081130.515366432IPR003657WRKY domain
SuperFamilySSF1182904.18E-25367430IPR003657WRKY domain
SMARTSM007742.1E-35371431IPR003657WRKY domain
PfamPF031064.1E-25373429IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MKAWGRAALS TSPKLEEWRA GRVNIREAIY SRSQTGWRCC FRGQLLWLQR GELRPPPPGT  60
ARARFLGGRS SVRRSSATTS QERVESKAKS TRSRSSSPAD GGNGSSTGGG GGPVARLATG  120
IDSKPGGSGL FQIAVDPYRI TGRPTQHPPR GPATSRSPSP PATAELHMAV DLMGERLAFR  180
EAAAAGLRSL ELLASSLSPR AAAPVGEIAG QAVAXXXXXX XXXXXXXRFR RAPVGVAPAE  240
TDSPPASPSR PCAPVLPAPK SQNDLVALDF EKPAPAAATS TSFLSSVTAA GGGEGSVSKG  300
QSLLAGVSSG KPPLPKRKHP CPGTVAPSPA AEATTAARPA TCHCSGKRRR KHLTTRTVRV  360
PASSRASTDV PSDEHSWRKY GQKPIKGSPF PRGYYRCSAV KGCPARKHVE RDASDPATLV  420
VTYEGDHRHD SAAAAAAPQA VA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-193664301275Probable WRKY transcription factor 4
2lex_A3e-193664301275Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00505.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004972520.12e-68probable WRKY transcription factor 17
TrEMBLA0A1E5VBK61e-73A0A1E5VBK6_9POAL; Putative WRKY transcription factor 11
STRINGSi014163m9e-68(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61738171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.12e-45WRKY DNA-binding protein 11