PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00565.1.g00340.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 749aa    MW: 80913 Da    PI: 10.2749
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00565.1.g00340.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.42e-51301571128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   lppGfrFhPtdeelv++yL++kv +  +     ++evdi+++ePw+Lp +++ +e+ewyfFs rd+ky+ g r+nrat +g
  Zpz_sc00565.1.g00340.1.am.mk  30 LPPGFRFHPTDEELVTFYLAAKVFNGACCG-VDMAEVDINRCEPWELPGAAQMGEREWYFFSLRDRKYPAGLRTNRATGAG 109
                                   79************************9777.34***************8888999************************** PP

                           NAM  82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   yWkatgkd+ev+++ +g+l+g+kktLvfykgrap+gekt+Wv+heyrl
  Zpz_sc00565.1.g00340.1.am.mk 110 YWKATGKDREVICTtTGALIGMKKTLVFYKGRAPRGEKTKWVLHEYRL 157
                                   ***********99878899***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.48E-6219180IPR003441NAC domain
PROSITE profilePS5100557.85630180IPR003441NAC domain
PfamPF023651.2E-2631157IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 749 aa     Download sequence    Send to blast
MMMHQPQAMG DALWDILGEE MAAAAGEHGL PPGFRFHPTD EELVTFYLAA KVFNGACCGV  60
DMAEVDINRC EPWELPGAAQ MGEREWYFFS LRDRKYPAGL RTNRATGAGY WKATGKDREV  120
ICTTTGALIG MKKTLVFYKG RAPRGEKTKW VLHEYRLDGD FAAGRRFCKE EWVICRIFHK  180
AVDQYSKMVM SMSPYYHATD PSSFCFQQEP PHAALPLPNP SICSGLAHAL PFHHSLENHH  240
QGKSNVDTNG LPAASSLDQP NGSGGVNMCD SSAMPMLPAF PSFASVVVTG KAAPHQQEAG  300
VNAGPPEPPT LLDGYIAHSG VLYEMSPPAA PRGASEMDGD HECLPMQGVG LAGAGEEQVA  360
TGRPRRDPCV RAPRDQSLVN RRRRRIGSGR RPAPIDLVVP KGWPATRFAA KVKPLTAGRQ  420
QQIAVNLKSQ IFVKTEEDRQ CKRPTKPLAQ HQIEYDAASH LNSPFLSNSC LPGHWAAVRR  480
ETGRMWAARG RPQLLTNNIP RCCFSGFRWE FRRRSASEPG EPPSAFSDEL GRGASHTQLF  540
SRQPGPMKQS GPCSTTPIGP GPQASLGTRA EQKSSRHRAA AGPRLAVDVG RPRACSGARA  600
RPEEQGLRSV SVLPRASRRR GNAGVITAGE KTLTPHCGSS RSRAPPAPRI NGPGAAGDGP  660
RAGDRTRVCP PCVVVIRNGT GRMHGIGMAG TSAGGTRPCR SAVNSAGTAR ASMHRAAARP  720
HADTHVRMLH GKLRWLGAHR GTRAVALSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A4e-463018020168NAC domain-containing protein 19
3swm_B4e-463018020168NAC domain-containing protein 19
3swm_C4e-463018020168NAC domain-containing protein 19
3swm_D4e-463018020168NAC domain-containing protein 19
3swp_A4e-463018020168NAC domain-containing protein 19
3swp_B4e-463018020168NAC domain-containing protein 19
3swp_C4e-463018020168NAC domain-containing protein 19
3swp_D4e-463018020168NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00565.1.g00340.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0612700.0BT061270.1 Zea mays full-length cDNA clone ZM_BFb0128J16 mRNA, complete cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP112373341
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76420.13e-81NAC family protein