PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00671.1.g00080.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 233aa    MW: 24531.8 Da    PI: 6.5271
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00671.1.g00080.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY36.11.3e-11201221222
                                   --SS-EEEEEEE--TT-SS-E CS
                          WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                                   +Dgy+WrKYGqK vk+s++pr
  Zpz_sc00671.1.g00080.1.sm.mk 201 EDGYRWRKYGQKAVKNSPYPR 221
                                   8*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-12185222IPR003657WRKY domain
SuperFamilySSF1182901.06E-9192222IPR003657WRKY domain
PROSITE profilePS5081113.092195221IPR003657WRKY domain
SMARTSM007741.0E-5200233IPR003657WRKY domain
PfamPF031061.0E-7201222IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MSSSGEFYFH DELASLFAQQ QQRPAPAGDM MQQQASTWFA DFLQAGTPTA ADYDDLLLCR  60
ALDLPVSAAA DDVVKRELVV DTGGGGARTP SGGGTAPVTP NTTSSMSSSS SEAARGAGGG  120
GRGLGGGGGF GAGEEDSPAG RCKKEEGDGE EIKSGKGDQE DGDKSKKGAG SAAKAKGNKG  180
EKRQRQPRFA FMTKSEVEHL EDGYRWRKYG QKAVKNSPYP RYAHTHVFST YTF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119127GGRGLGGGG
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00671.1.g00080.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002458273.16e-71probable WRKY transcription factor 48
TrEMBLC5XFY71e-69C5XFY7_SORBI; Uncharacterized protein
STRINGSb03g030480.12e-70(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62337173
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.12e-19WRKY DNA-binding protein 28