PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00685.1.g00010.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 243aa MW: 27373.9 Da PI: 8.0211

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00685.1.g00010.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	50.3	7.7e-16	9	149	4	128
NAM 4 GfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat 70 f F P++ l+++yL+kkv+g + l + +++ d++++ P L + + +++ ++ yfF+k++ ++ Zpz_sc00685.1.g00010.1.am.mk 9 SFSFCPSNALLINHYLHKKVDGADvfsdLANAAYFHDEDVCSARPDVLVRahtiparvpsREAGDGQRFYFFTKARFIGNK 89 589*******************8865333345**********744677776653222244466777777654444 PP NAM 71 ...gkrknratk.sgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 +r+ + t + +W+a g+ k+v ++ g + L ++ k +++ ek W+m ey++ Zpz_sc00685.1.g00010.1.am.mk 90 lnmRSRTIKNTGdKETWHAEGSAKPVDG---TADGYMTKLSYHvKTGSKTVEKPGWIMTEYSF 149 1013344443334778*****965...6779999999995446666789******86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	21.865	6	165	IPR003441	NAC domain
SuperFamily	SSF101941	2.09E-21	8	165	IPR003441	NAC domain
Pfam	PF02365	5.4E-12	10	148	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence Send to blast
MEMAAMDDSF SFCPSNALLI NHYLHKKVDG ADVFSDLANA AYFHDEDVCS ARPDVLVRAH 60 TIPARVPSRE AGDGQRFYFF TKARFIGNKL NMRSRTIKNT GDKETWHAEG SAKPVDGTAD 120 GYMTKLSYHV KTGSKTVEKP GWIMTEYSFK DTKEGDLVLC KIYKSPRVPG RSKAPSLPAM 180 SDRKRKVADD LEEATPSTQP RQIDEDHQHA AVLEFGAERS QLMLETQTIT THEHGRVWCS 240 FRK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00685.1.g00010.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6280	15	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28500.1	1e-07	NAC domain containing protein 73