PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00687.1.g00040.1.am.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 476aa    MW: 51063.3 Da    PI: 7.1296
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00687.1.g00040.1.am.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.54.7e-27249309259
                                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                     dDg++WrKYGqK++ g++fpr+YYrCt++   gC ++k+v+rs++d  v+++tY+geH ++
  Zpz_sc00687.1.g00040.1.am.mkhc 249 DDGFSWRKYGQKDILGAKFPRGYYRCTYRgtqGCLATKQVQRSDSDLCVFDVTYQGEHICH 309
                                     8***************************99889*************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5017415.177140IPR000467G-patch domain
SMARTSM004433.3E-10144IPR000467G-patch domain
PfamPF015851.1E-15440IPR000467G-patch domain
Gene3DG3DSA:2.20.25.803.5E-26242310IPR003657WRKY domain
PROSITE profilePS5081122.768243306IPR003657WRKY domain
SuperFamilySSF1182901.12E-23247310IPR003657WRKY domain
SMARTSM007743.1E-38248310IPR003657WRKY domain
PfamPF031061.5E-24249309IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0010150Biological Processleaf senescence
GO:0010193Biological Processresponse to ozone
GO:0010200Biological Processresponse to chitin
GO:0031347Biological Processregulation of defense response
GO:0042542Biological Processresponse to hydrogen peroxide
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0009507Cellular Componentchloroplast
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    Send to blast
MTAAQRMMAK MGWKEGQGLG KQEQGITAPL VAKKTDRRAG SDPLRHGPLL LLSVYYAETG  60
LKIPRQFFPP SSMTSPLPTP VREFLFFPRD LDLGCVQQPN LSLLLHRGRI LDPTPTCEVT  120
IMQDGAGGGG GEGGMHLLLS ILANGEDQAR LLAELPADDP RLGAEHYRAA ARRLQCTLGR  180
AMSVARAIEA AASSRGTDSP RSADEGSGGS GTVPVEALER PAVCKRRKGL PRWTAKFRVP  240
DANLEATPDD GFSWRKYGQK DILGAKFPRG YYRCTYRGTQ GCLATKQVQR SDSDLCVFDV  300
TYQGEHICHQ KPRHASASVA GASHHHDMSQ PPPPPDPSTE LLPGFTERLK VETTTDQAPL  360
HASSSRDQDH AVSASPFAFH AGGVAPDEAF ASVPAGASYY AVPHCLEPGS GYDDYGYDLP  420
RMRGAGSELG EVVSRATAPV AADPSNAGFE YSLYHHGEFD PHLPFAPSGG GCGSRH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-202503121879Disease resistance protein RRS1
5w3x_D2e-202503121879Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00687.1.g00040.1.am.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025811264.11e-116probable WRKY transcription factor 53
TrEMBLA0A2S3HLN71e-114A0A2S3HLN7_9POAL; Uncharacterized protein
STRINGSi008812m1e-108(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP133402730
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.13e-37WRKY family protein