PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00727.1.g00100.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 240aa    MW: 25829.1 Da    PI: 8.8832
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00727.1.g00100.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.4e-1995138249
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaa 49 
                                   +y+GVr ++ +grW+AeIrdp     +  +r++lg+f+taeeAa+a++aa
  Zpz_sc00727.1.g00100.1.sm.mk  95 RYPGVRLRP-WGRWAAEIRDP-----QlrRRVWLGTFDTAEEAAAAYDAA 138
                                   69*******.**********9.....445*******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.75E-1394127No hitNo description
Gene3DG3DSA:3.30.730.107.7E-2395145IPR001471AP2/ERF domain
SMARTSM003808.1E-2295165IPR001471AP2/ERF domain
SuperFamilySSF541716.15E-1795145IPR016177DNA-binding domain
PROSITE profilePS5103219.21695157IPR001471AP2/ERF domain
PfamPF008478.3E-1395139IPR001471AP2/ERF domain
PRINTSPR003677.2E-1096107IPR001471AP2/ERF domain
PRINTSPR003677.2E-10118134IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MDPSLESRKA VAAEAATEEG KVAVEVEQPA APRCRLVRII VHDEDATDSS SDEEEEVVEP  60
RVRAPPPAAA GVKRKRVLLR AGGGEGEERK AAEARYPGVR LRPWGRWAAE IRDPQLRRRV  120
WLGTFDTAEE AAAAYDAACX XXXGATPDQP PPPAHRPTAP PLPPRPPLPR RPSQQERKPQ  180
PRESPAGSEE QSAAAVASVA EPFVPLPVWA LLSGKRKKRS GCGGRVPALR TPAAEEAGRA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-13911441064Ethylene-responsive transcription factor ERF096
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00727.1.g00100.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2281033
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-13cytokinin response factor 4