PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00799.1.g00090.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 143aa    MW: 15334.7 Da    PI: 6.7337
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00799.1.g00090.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY25.62.5e-083501958
                                  SS-EEEEEE-ST...T---EEEEEE-SSSTTE.....EEEEEES--SS CS
                          WRKY 19 efprsYYrCtsa...gCpvkkkversaedpkv.....veitYegeHnh 58
                                   + rsYYrCt +   gCp+k+ v+r++   ++      +++Y   H++
  Zpz_sc00799.1.g00090.1.am.mk  3 AHCRSYYRCTWSaeqGCPAKRTVQRNDVGDDIggspkYTVVYMAVHTC 50
                                  578*******988889*********98554432222267788888877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508118.662128IPR003657WRKY domain
SMARTSM007741.0E-5252IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.3E-9351IPR003657WRKY domain
PfamPF031061.4E-9350IPR003657WRKY domain
SuperFamilySSF1182901.57E-8451IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MAAHCRSYYR CTWSAEQGCP AKRTVQRNDV GDDIGGSPKY TVVYMAVHTC TANDSMEKPV  60
ILETTAVQAA YKKPCGAKNI ATPAAFLPPP AVESAVAAES SIPILHAVLK IEPDVSLASG  120
EMKYEQFIGC KGCLLFNFEV FGA
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00799.1.g00090.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0A9HC428e-27A0A0A9HC42_ARUDO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP57603058
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40750.12e-08WRKY DNA-binding protein 54