PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00800.1.g00180.1.am.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 231aa    MW: 26081.2 Da    PI: 5.7941
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00800.1.g00180.1.am.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM531.1e-1638953128
                             NAM  53 aeekewyfFskrdkkyatgkrknra..........tksgyWkatgkdkevlskkgelvglkktLvfykg..rapkgekt 119
                                     ++ + ++fF++  k+y  g+rk+r            ++ +W++tgk+k++++ +g ++g kk+Lv+yk   r  ++e++
  Zpz_sc00800.1.g00180.1.am.mkhc   3 KDGNVVHFFHRVLKAYGCGQRKRRRvitctdhtvsDEHMRWHKTGKSKAIYN-NGVKKGWKKILVLYKTpqRGGRPERA 80 
                                     456678******************6588888876545788************.999***********7533666778** PP

                             NAM 120 dWvmheyrl 128
                                      Wvmh+y+l
  Zpz_sc00800.1.g00180.1.am.mkhc  81 PWVMHQYHL 89 
                                     *******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.3351108IPR003441NAC domain
SuperFamilySSF1019413.01E-193108IPR003441NAC domain
PfamPF023651.1E-5989IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MKKDGNVVHF FHRVLKAYGC GQRKRRRVIT CTDHTVSDEH MRWHKTGKSK AIYNNGVKKG  60
WKKILVLYKT PQRGGRPERA PWVMHQYHLG EEEDEKDGEL VVSKVFYQLP TKHMENAEAE  120
TDDEEPDAFA AGIGPKTPKT NTPQPRRANN SPCETEHNAS ILLDQDEELT IPIVGPDDDD  180
VGNHALCTGE TQIVGEALRA QPSLDESLLC LEDPEIQFGS QESIGSWLDR I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12226RKRRR
22327KRRRV
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00800.1.g00180.1.am.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025818203.11e-98SUPPRESSOR OF GAMMA RESPONSE 1-like isoform X1
RefseqXP_025818210.13e-99SUPPRESSOR OF GAMMA RESPONSE 1-like isoform X2
TrEMBLA0A3L6QEE72e-98A0A3L6QEE7_PANMI; NAC domain-containing protein 73-like
STRINGPavir.Aa01341.1.p1e-100(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21103799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14490.19e-28NAC domain containing protein 85