PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00804.1.g00310.1.sm.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 307aa    MW: 33070 Da    PI: 7.0659
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00804.1.g00310.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.94.5e-08197251557
                                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvke..LeaeNkaLkkeleelkkeva 57 
                                     kr +r   NR +A rs +RK  +i+eLe k ++  L ++N +Lk +l+ ++++++
  Zpz_sc00804.1.g00310.1.sm.mkhc 197 KRVKRILANRQSAARSKERKMRYIQELEHKRDStgLATQNNELKIRLQAMEQQAQ 251
                                     899**************************987666**************999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.4E-8193259IPR004827Basic-leucine zipper domain
PfamPF077164.3E-6194249IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-7197251No hitNo description
SuperFamilySSF579591.29E-7197250No hitNo description
CDDcd147031.75E-14198249No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MDDPARHHLS PQLGAEQQQP ATLLSPPLPP PAPVKREAVA PSSEGCGSDG DDAALYDLVN  60
AYMDLDGLDQ LNSSEDRHDD RASGTRAGSA AESSENEVES QSTSAERKEP GKARHSRSLS  120
MDSFMGKLNL AAGDESPMLP LPSPSGGGLA RTGSGSLEGG AAALFDMEFA NGEFTEAEKK  180
KIMANQRLAQ IALTDPKRVK RILANRQSAA RSKERKMRYI QELEHKRDST GLATQNNELK  240
IRLQAMEQQA QLRDGKLIAS KRLQLKTEEY KAGDMPAAGP SVVQGPVRTG PAGPRGTMMG  300
RRWCQVQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00804.1.g00310.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025822599.11e-125transcription factor RF2a-like
TrEMBLA0A270R6V21e-125A0A270R6V2_9POAL; Uncharacterized protein
STRINGPavir.Fa00090.1.p1e-124(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62473650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.36e-46bZIP family protein