PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00809.1.g00030.1.sm.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 166aa MW: 18006.5 Da PI: 6.1018

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00809.1.g00030.1.sm.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.2	0.00034	2	17	39	54
TCHHHHHHHHHHHHHH CS HLH 39 sKaeiLekAveYIksL 54 +Ka+i + A+eYI +L Zpz_sc00809.1.g00030.1.sm.mk 2 DKASIIKDAIEYILQL 17 8**************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	5.82E-5	1	37	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.2E-4	1	32	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence Send to blast
MDKASIIKDA IEYILQLHQL ERQLLAEISL LEAASTHSLL VDTPSSAISA AGAAAAMADS 60 CCDGHVVSPT KKMKAAPCPD TETQRNVYGS FKYTGLLQAT NDILSEEYLK FKKCSKMELG 120 DCYQAVTARV QNNIKNSMGA DSHGVDFVVY GTPPIKREED TSACKR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00809.1.g00030.1.sm.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP42014	2	2