PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00847.1.g00100.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 166aa    MW: 18519.9 Da    PI: 5.8153
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00847.1.g00100.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.53.7e-061191381029
                                   HHHHHHHHHHHHHHHCTSCC CS
                           HLH  10 rrRRdriNsafeeLrellPk 29 
                                   ++RR+riN+++  L+el+P+
  Zpz_sc00847.1.g00100.1.sm.mk 119 KKRRQRINERLRMLQELIPN 138
                                   9******************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.7E-5106140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.23E-6106141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.73E-4118142No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MEMVDCAAGW SSVDTNCKES EMIAHLQSVF WGGSCDLDVV DPSLSSTNST SLVDHESFST  60
GALLNITQTM GFDGQYGSKR KSQPDELVIS GEEEYCPVPA ATRVPRKKSE KDSQSRYAKK  120
RRQRINERLR MLQELIPNGT KLLSSDEMWM YAPLAYRGIN IGNGMK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105121RKKSEKDSQSRYAKKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00847.1.g00100.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A3B5Z3342e-35A0A3B5Z334_WHEAT; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4687933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.14e-19bHLH family protein