PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00850.1.g00200.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 344aa    MW: 35833.4 Da    PI: 11.1699
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00850.1.g00200.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like35.62.1e-11244268226
                       G2-like   2 prlrWtpeLHerFveaveqLGGsek 26 
                                   pr+rWt++LH+rFv+ave LGG+e+
  Zpz_sc00850.1.g00200.1.am.mk 244 PRMRWTSTLHARFVHAVELLGGHER 268
                                   9*********************997 PP
2G2-like38.42.7e-123093332751
                       G2-like  27 AtPktilelmkvkgLtlehvkSHLQ 51 
                                   AtPk++l+lm+vk+Ltl+hvkSHLQ
  Zpz_sc00850.1.g00200.1.am.mk 309 ATPKSVLQLMDVKDLTLAHVKSHLQ 333
                                   9************************ PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.5E-23242268IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.5E-23309333IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-7309333IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MEATASAPDL SLHISLPSGN AASPSSAPGL GAGGVVGGRG AAGSPGGDPW RRLNGSTAST  60
ELSLSPPQRQ QEGAASALPW RLRPSTAANA PSSSSSASSA EAAAFLPVTV PRLSLDAAAS  120
AEAARGRPIN GVPVYSSPGA GSSPFLGAGD YRPRQPKVGL YNPYPSSAWP SSLRSTTAPV  180
TFHHSPSAYH RMLSGTGRLH LHGALADTLR GYGAGHQQYF GSSLASSRYV PRLPAASRRC  240
MRAPRMRWTS TLHARFVHAV ELLGGHEREW WPPAGQFLGN LGSLHARVTR SAKLLRLISL  300
SPYVHGPGAT PKSVLQLMDV KDLTLAHVKS HLQASELSPP AEVL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that regulates abaxial identity during leaf development. {ECO:0000269|PubMed:18594992}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00850.1.g00200.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9350032e-59EU935003.1 Zea mays cultivar B73 kanadi1 (kan1) mRNA, complete cds.
GenBankJX4699822e-59JX469982.1 Zea mays subsp. mays clone UT3342 G2-like transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025820100.13e-98probable transcription factor RL9 isoform X2
SwissprotQ0J2354e-41ROLL9_ORYSJ; Probable transcription factor RL9
TrEMBLA0A3L6RKZ81e-103A0A3L6RKZ8_PANMI; Putative transcription factor RL9
STRINGPavir.Fb00812.1.p1e-101(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25583787
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.15e-26G2-like family protein