PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00903.1.g00050.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 608aa    MW: 66571.4 Da    PI: 10.835
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00903.1.g00050.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.8e-173080156
                           AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56
                                  + y+GVr++   g+Wv+eIr+       +  r++lg++ t+e+Aa+a++aa+++l+g+
  Zpz_sc00903.1.g00050.1.am.mk 30 PVYRGVRFR--AGKWVSEIRElR-----KpSRIWLGTYPTPEMAAAAYDAAALALRGA 80
                                  68*****96..5*********66.....68*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.1E-113079IPR001471AP2/ERF domain
SuperFamilySSF541712.42E-173188IPR016177DNA-binding domain
PROSITE profilePS5103218.9663187IPR001471AP2/ERF domain
SMARTSM003801.1E-233193IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.2E-253188IPR001471AP2/ERF domain
PRINTSPR003677.1E-63243IPR001471AP2/ERF domain
PRINTSPR003677.1E-66989IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 608 aa     Download sequence    Send to blast
MERGRQDQER FVRPGASACV RRARAETRHP VYRGVRFRAG KWVSEIRELR KPSRIWLGTY  60
PTPEMAAAAY DAAALALRGA GAALNFPDAA RALPAPASXX XXRRRGGRSG RGVRRCRRLG  120
EGGGRRCYRP CNGDADYERR DDDGGGGAAM EGGVVDEDDV FEMPRLMVSM AEGLMMSPPV  180
LGPPAAASLE DEDGVSLVWC EMRTRAAAVC WQMDACGISP DVDTGITLGC MPGSGDVDVA  240
RRAVLPHWLP VAWCRPSGLS CAPKHSKAKQ LPDLLCTHRH RVERRIETRS YRDRWTESQG  300
GQAVSHAGGA SGQHGNTSGA RDYRNDGTAG APISRPKQNA AGPQLLPHRH RFAAARPAVE  360
TAPEVRPVDA PRYTARAAYR NSIPATTVDV EYKAATSHPI IEHDTLDERV MRTSDTLESA  420
PASSLASIEA PWLAAARWEP VAAVRWRKMT PGSSTSVGQN VGEHFARPRL DSASMFSAVD  480
QQGQAGQWHK KPNTPLTRGR TRIPPIPPPT LRRAPRPASL AAWRSLSPPR EPQPETSTCS  540
RMKTSFNSRS FFYYHPHGRP ARARRTAEAA RQPRQLPSPL KIARAQQLNA AGHRARTLAR  600
TFCLLLHC
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00903.1.g00050.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-15ERF family protein