PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00911.1.g00120.1.am.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 591aa    MW: 64079.1 Da    PI: 4.2658
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00911.1.g00120.1.am.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM158.52.7e-49161521128
                             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkya........ 69 
                                     l+pGfrFhPtdeelv++yL++++ g +l++ ++i+evd+y++ePwdLp+  ++++++++wyfF++ d+k +        
  Zpz_sc00911.1.g00120.1.am.mkhc  16 LAPGFRFHPTDEELVSYYLRRRILGCRLRV-DAIAEVDLYRLEPWDLPAlsSIRSRDNQWYFFTRLDRKITgagaggrg 93 
                                     579***************************.99***************4458888999***********9977777766 PP

                             NAM  70 .tgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                       g+r+nrat++gyWk+tgkd+ev++ +g+lvg+kktLvf++grapkg +t+Wvmheyrl
  Zpz_sc00911.1.g00120.1.am.mkhc  94 gPGNRTNRATQQGYWKTTGKDREVCH-RGKLVGMKKTLVFHNGRAPKGARTNWVMHEYRL 152
                                     5567**********************.999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-5212158IPR003441NAC domain
PROSITE profilePS5100550.1516172IPR003441NAC domain
PfamPF023653.5E-2718152IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 591 aa     Download sequence    Send to blast
MSNLSPLDSS PAEVRLAPGF RFHPTDEELV SYYLRRRILG CRLRVDAIAE VDLYRLEPWD  60
LPALSSIRSR DNQWYFFTRL DRKITGAGAG GRGGPGNRTN RATQQGYWKT TGKDREVCHR  120
GKLVGMKKTL VFHNGRAPKG ARTNWVMHEY RLIDADGPQN GAQYGAPYME EEWEDDDDAV  180
EKGAAIGASA NVAATSNAAD EESNEEEENG YSKASELAQA HEMLTPPDMV ALQAQGSNET  240
SDGSCADAAV SLEEIRSSTV SAEIIGRPKG HNAADDNFSA AGFSGCPTRD DGYVGQGSDP  300
ANGKSTNWPL RAYCNQNPVN ETISADEFFD TENVTNENAY SGQQQICQSD YENLNLQADG  360
FVAQRQVDDG MAFYDAPPNW VDGSDDIYLS DIFNEPLGNQ SLFDGDDLMD YFVDAPENDF  420
KYDMVGSAEG SGDQLTEMSN FAQKGDYKDN STFDGISKTS VANGHSGASS SCFHEDQYPE  480
NAVQADKPLG KLASMLGSIP AAPAFASEDP PAARKSLLTG VNPSSIRVNA GIVQLGGLNF  540
TASEHRPLQK NGDFSLLLSF TMESNVASKS LSFEPDTQVG AIPMVMRGGL Y
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-441215211140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00911.1.g00120.1.am.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0641331e-138BT064133.1 Zea mays full-length cDNA clone ZM_BFc0140G07 mRNA, complete cds.
GenBankBT0675811e-138BT067581.1 Zea mays full-length cDNA clone ZM_BFc0097N06 mRNA, complete cds.
GenBankEU9759361e-138EU975936.1 Zea mays clone 505923 NAC domain-containing protein 78 mRNA, complete cds.
GenBankKJ7269851e-138KJ726985.1 Zea mays clone pUT3686 NAC transcription factor (NAC26) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025817703.10.0NAC domain-containing protein 53-like
TrEMBLA0A2S3GUQ20.0A0A2S3GUQ2_9POAL; Uncharacterized protein
STRINGPavir.Ab03009.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129312833
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.18e-55NAC domain containing protein 53