PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00924.1.g00110.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 408aa    MW: 44138.6 Da    PI: 8.663
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00924.1.g00110.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.82.3e-12217257146
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaa 46 
                                   ++ykGVr+++ +g+Wv+eIr+p +   r r +lg++  +e Aa a+
  Zpz_sc00924.1.g00110.1.am.mk 217 CRYKGVRRRR-WGKWVSEIRVPGT---RERLWLGSYAAPEAAA-AR 257
                                   78*****777.**********943...5**********55555.44 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.1E-6217256IPR001471AP2/ERF domain
CDDcd000184.21E-12217248No hitNo description
SuperFamilySSF541712.09E-10218256IPR016177DNA-binding domain
PROSITE profilePS5103215.185218255IPR001471AP2/ERF domain
SMARTSM003802.2E-7218268IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.4E-15218256IPR001471AP2/ERF domain
PRINTSPR003673.7E-6219230IPR001471AP2/ERF domain
PRINTSPR003673.7E-6241257IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MLLRLYGGAV ITLITEGPDR IADERGRDEG RKHVDMSCVH MHEYQIQSLT APSSEAHHAP  60
TRCTIVRTFS GRSLSPFCCF TRDGCCLAVV KSQLEQRLDP LAGVCVSACA STRTTTVTVV  120
GPLRPAAPSH TQKSASRSQI HLFASVATGQ NDRHFKRAGS APSATLTSPF PQTRTPPSQA  180
RRLEVEPTER AWGLGTRAGH RRREACVTMS RGADRRCRYK GVRRRRWGKW VSEIRVPGTR  240
ERLWLGSYAA PEAAAARERA SPVSPARPLV DRVGIGIARC GGHDEREHWP YAATAGSDST  300
GIASATATSW GTAPRSDGSR GSSADAACEL ERRLVYGDIS VDDIDILIVS RLPCHGPTAM  360
NLSDASTAGQ HGSLVVAPAE NEQVHEPESN ALWDATRCIW SVSVSDSE
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00924.1.g00110.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9545308e-35EU954530.1 Zea mays clone 1469452 transcriptional factor TINY mRNA, complete cds.
GenBankKJ7276768e-35KJ727676.1 Zea mays clone pUT5603 AP2-EREBP transcription factor (EREB63) gene, partial cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2440734