PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00939.1.g00200.1.sm.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 344aa    MW: 37570.4 Da    PI: 10.2463
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00939.1.g00200.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.51e-21220282163
                                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                     +ke+krerrkq+NRe+ArrsR+RK+ae+eeL++kv+ ++aeN++L++e+++l++ ++klk+e+
  Zpz_sc00939.1.g00200.1.sm.mkhc 220 DKESKRERRKQSNRESARRSRLRKQAETEELARKVELMTAENTSLRNEINKLSESSQKLKMEN 282
                                     689**********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077776.4E-22189IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1705.0E-17217279No hitNo description
SMARTSM003384.1E-20220284IPR004827Basic-leucine zipper domain
PfamPF001708.8E-20221282IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.288222285IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-11224279No hitNo description
CDDcd147022.30E-20225273No hitNo description
PROSITE patternPS000360227242IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MGHDEAVVTQ ISGKAPSHAK DQPATFPYLD WSAMQSYYGP GILPPAFFNP GHVPSPFMWA  60
PQNLSTAAFG KPYAAIYPHA GGFLHPFMPL MVNPLNAEPA KSVNSKDNSL NKKMKETDGT  120
AVSTGSGNSE KTSGDYSVEG SSDGNNQRAC GTPKKRTIDD MTTSETCGAS ILNDKPREPR  180
RSTTLANVCI PDAAVKPCAS TGSDFRVSGT QSTEWPTKDD KESKRERRKQ SNRESARRSR  240
LRKQAETEEL ARKVELMTAE NTSLRNEINK LSESSQKLKM ENSALMTKRL RTKQPPRRRQ  300
LAPSQIFLSM MTGAGAPRHM EHGAPKLRQL LGSGPLPADV VAAR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1236242RRSRLRK
2236243RRSRLRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00939.1.g00200.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU4399380.0EU439938.1 Eleusine coracana cultivar GPU28 G-box binding factor 3 (GBF3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021310900.11e-175G-box-binding factor 3-like
TrEMBLD2CP300.0D2CP30_ELECO; G-box binding factor 3
STRINGSb03g030050.11e-175(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.21e-46G-box binding factor 3