PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00953.1.g00050.1.sm.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 62aa MW: 7259.53 Da PI: 11.0644

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00953.1.g00050.1.sm.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	23.1	1.6e-07	2	26	29	53
G2-like 29 PktilelmkvkgLtlehvkSHLQkY 53 Pk+il+l ++kg++++++kSHLQ + Zpz_sc00953.1.g00050.1.sm.mk 2 PKRILQLKGMKGVSVSQIKSHLQEF 26 ***********************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	8.4E-5	2	26	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 62 aa Download sequence Send to blast
MPKRILQLKG MKGVSVSQIK SHLQEFVDAC KKETSIDIKV GQNVQKLTVR EWLERRHQRN 60 KS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00953.1.g00050.1.sm.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP71001	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04580.1	3e-07	G2-like family protein