PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00962.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 208aa    MW: 22627.8 Da    PI: 10.9214
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00962.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.56.9e-13164202143
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAa 43 
                                   ++y GVr+++ +g+W+Ae+rdp+    +  r++lg+f tae A+
  Zpz_sc00962.1.g00010.1.am.mk 164 CQYYGVRRRP-WGKWAAEVRDPV----KgVRVWLGTFPTAESAR 202
                                   5788******.**********75....44**********99997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.15E-16164201No hitNo description
PfamPF008471.3E-7165202IPR001471AP2/ERF domain
SMARTSM003804.2E-8165207IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-12165203IPR016177DNA-binding domain
PROSITE profilePS5103216.845165208IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-17165201IPR001471AP2/ERF domain
PRINTSPR003673.0E-8166177IPR001471AP2/ERF domain
PRINTSPR003673.0E-8188204IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MVSTPRPSRS SHHPTRRNNS VIATKQITQD VAVPSHGRPI KASKPCLPAC KLPKGIEAFV  60
ASRLPEGCAP ALPSHPRPTI RLIRSIKMCG GAILAELIPT EPARRVTRGH PWAAGKTSDD  120
DFEAAFRAFD DFENSDGEDN EGPVGFGGAS AAGSKRSSSR RRPCQYYGVR RRPWGKWAAE  180
VRDPVKGVRV WLGTFPTAES ARVLNQVL
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00962.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025797880.15e-36ethylene-responsive transcription factor ERF073-like
TrEMBLA0A2T7CGR11e-34A0A2T7CGR1_9POAL; Uncharacterized protein
TrEMBLA0A2T8I6491e-34A0A2T8I649_9POAL; Uncharacterized protein
STRINGPavir.Ia04158.1.p2e-36(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43712654
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.33e-18ERF family protein