PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01076.1.g00070.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 165aa    MW: 17479.7 Da    PI: 7.5646
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01076.1.g00070.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.70.0002412303755
                                  -STCHHHHHHHHHHHHHHH CS
                           HLH 37 KlsKaeiLekAveYIksLq 55
                                  +++Ka+i   AveY+ksLq
  Zpz_sc01076.1.g00070.1.am.mk 12 RMDKASIIGDAVEYVKSLQ 30
                                  799***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474599.68E-61149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.0E-71246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MLLLTAAVVC VRMDKASIIG DAVEYVKSLQ SHARKLKEEV AALEARQWSS SPGPQDPRHD  60
RGVAVANDKR QDEDATGGAR VASVGATQVG EGRFLVTVEC ERRDGAAARL FAAVESLACF  120
RVESSSVGRS APDRLVSTAT LKVTIAGGGA AHSFRHALDA RLHDD
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01076.1.g00070.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025826116.13e-46transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like isoform X2
TrEMBLA0A2S3I6T67e-45A0A2S3I6T6_9POAL; Uncharacterized protein
TrEMBLA0A2T7CU728e-45A0A2T7CU72_9POAL; Uncharacterized protein
STRINGSb06g012030.11e-42(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP55463057
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.12e-21FER-like regulator of iron uptake