PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01107.1.g00050.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 136aa    MW: 14777.8 Da    PI: 12.379
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01107.1.g00050.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.51.2e-161968255
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  gy+GVr+++ +g+Wv+eIr+p   g r r +lg++ t+e Aa a++ a   l+g
  Zpz_sc01107.1.g00050.1.sm.mk 19 GYRGVRRRR-WGKWVSEIRVP---GSRVRLWLGSYATPEAAAVAHDTAVCLLRG 68
                                  8*****777.**********8...435********************9988876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.7E-161970IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.4E-251983IPR001471AP2/ERF domain
SMARTSM003801.1E-261988IPR001471AP2/ERF domain
PROSITE profilePS5103220.2571982IPR001471AP2/ERF domain
PfamPF008471.1E-81963IPR001471AP2/ERF domain
PRINTSPR003676.1E-92031IPR001471AP2/ERF domain
PRINTSPR003676.1E-94258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MKRATGSRDA EEPEERRRGY RGVRRRRWGK WVSEIRVPGS RVRLWLGSYA TPEAAAVAHD  60
TAVCLLRGGA VGGGDVAALN FPERAAAAXX XXVPAVRAAR GVRRRHGRGR AARGGAGQRR  120
GSSGVAWAPR FRCRCS
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01107.1.g00050.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9545303e-69EU954530.1 Zea mays clone 1469452 transcriptional factor TINY mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020195624.16e-33ethylene-responsive transcription factor ERF020-like
SwissprotQ9C9I85e-22ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A3B6EME67e-32A0A3B6EME6_WHEAT; Uncharacterized protein
STRINGGRMZM2G307152_P012e-26(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP64332951
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.11e-12ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]