PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc01158.1.g00150.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 912aa MW: 99488.3 Da PI: 10.5753

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc01158.1.g00150.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	91.4	1.1e-28	649	746	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsf 80 ++ r+ws eDe+++L++li f+ k+g s+ +d+ ++ +++++++ +++s++ql++KirrLK+K+k +ak+g+ep++ Zpz_sc01158.1.g00150.1.am.mk 649 RAPRVWSHEDEVTILRALIAFRGKKGRlpSSIQDTGKLESQIRGQLTANASTTQLSDKIRRLKHKYKLLAIRAKKGREPDL 729 5689*********************888888******************************************** PP DUF573 81 skehdqkifelskkiWg 97 ++hd++++els+k+Wg Zpz_sc01158.1.g00150.1.am.mk 730 PTDHDREMYELSNKVWG 746 **************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03134	7.6E-24	275	350	IPR004345	TB2/DP1/HVA22-related protein
Pfam	PF04504	1.7E-26	651	746	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 912 aa Download sequence Send to blast
MPFTPACSKS PTNRQAKLRA LRPGPANSHK FSGPSTLDTA QTGPSVPFPS DDEPATAEGQ 60 VSQNMGSMDG RPTEKLLPCP SRGHDTRPLP HTRVATRRLT CRPEVKSRRP TARKAASAPR 120 FVVTQGVGVP GTTTFFHART TTPPSLRRRG HGQRRGRCKF LLLCTGSPVE RSKRSQDATS 180 TQGIRCPAPP LGEPGGEMGK SWTLITHLHT IAGYLAADPI VYPVFFDLLV LSNLTLANAC 240 QASPCSTLCK RRTDGLLLPS FLLRGRELTD LLSGLYASVC AMESPTKVDD EQWLSYWIIY 300 SFVTLLEMVA EPVLRWVPAV WYPVKLLFVA WLVLPQFKGA SFIYEKLVRE QLGRYRAGHF 360 RMGPGPVVVA DDEKKGTLLW DPGSGGRRSE VRRTDVLSAV ESLASLTQFS PAPPQTSNRQ 420 AAGRPNHAQR IQDSNPPKTL ANSCTLAGMA PKRPASAAAS GSASDASDAE AATGGHRRRR 480 HSPSPVRSRS RSKTPPSTIR PNAAALSSTP TSAGADYAAA SDSDADGRVP SPRGRRERSR 540 IPRSDSDVDA VGRIPAPLSS PRRSRDGSPR FHSDSDPDNF GASENGGEGN VSTLPRARRS 600 TRIETSNIKP VSSRLMGKPG RAAGASSSQG GSKRRHRSPA LPTAEHHKRA PRVWSHEDEV 660 TILRALIAFR GKKGRLPSSI QDTGKLESQI RGQLTANAST TQLSDKIRRL KHKYKLLAIR 720 AKKGREPDLP TDHDREMYEL SNKVWGYFSI DGFVEVGGSQ NARDEESNED QEIEESDEGM 780 ESGWDVHDQP KKVKAFRFEN GSRNAIAANG NAFATGGSSK ASQGGGGGGK DVSEKRKQMY 840 PYLWEAVEEL SKDHPSGQIF RKAFGVLEKA KAHAIEEKLR KFRMLEIRQQ LLRMDLMKDT 900 VTMVLDALED TG

Sequence ? help Back to Top

Protein Sequence Length: 912 aa Download sequence Send to blast

MPFTPACSKS PTNRQAKLRA LRPGPANSHK FSGPSTLDTA QTGPSVPFPS DDEPATAEGQ  60
VSQNMGSMDG RPTEKLLPCP SRGHDTRPLP HTRVATRRLT CRPEVKSRRP TARKAASAPR  120
FVVTQGVGVP GTTTFFHART TTPPSLRRRG HGQRRGRCKF LLLCTGSPVE RSKRSQDATS  180
TQGIRCPAPP LGEPGGEMGK SWTLITHLHT IAGYLAADPI VYPVFFDLLV LSNLTLANAC  240
QASPCSTLCK RRTDGLLLPS FLLRGRELTD LLSGLYASVC AMESPTKVDD EQWLSYWIIY  300
SFVTLLEMVA EPVLRWVPAV WYPVKLLFVA WLVLPQFKGA SFIYEKLVRE QLGRYRAGHF  360
RMGPGPVVVA DDEKKGTLLW DPGSGGRRSE VRRTDVLSAV ESLASLTQFS PAPPQTSNRQ  420
AAGRPNHAQR IQDSNPPKTL ANSCTLAGMA PKRPASAAAS GSASDASDAE AATGGHRRRR  480
HSPSPVRSRS RSKTPPSTIR PNAAALSSTP TSAGADYAAA SDSDADGRVP SPRGRRERSR  540
IPRSDSDVDA VGRIPAPLSS PRRSRDGSPR FHSDSDPDNF GASENGGEGN VSTLPRARRS  600
TRIETSNIKP VSSRLMGKPG RAAGASSSQG GSKRRHRSPA LPTAEHHKRA PRVWSHEDEV  660
TILRALIAFR GKKGRLPSSI QDTGKLESQI RGQLTANAST TQLSDKIRRL KHKYKLLAIR  720
AKKGREPDLP TDHDREMYEL SNKVWGYFSI DGFVEVGGSQ NARDEESNED QEIEESDEGM  780
ESGWDVHDQP KKVKAFRFEN GSRNAIAANG NAFATGGSSK ASQGGGGGGK DVSEKRKQMY  840
PYLWEAVEEL SKDHPSGQIF RKAFGVLEKA KAHAIEEKLR KFRMLEIRQQ LLRMDLMKDT  900
VTMVLDALED TG

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc01158.1.g00150.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0A9BR30	1e-167	A0A0A9BR30_ARUDO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2671	35	87

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	9e-13	DNA-binding storekeeper protein-related transcriptional regulator