PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01203.1.g00080.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family BES1
Protein Properties Length: 206aa    MW: 22590.2 Da    PI: 10.2054
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01203.1.g00080.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822121.71e-3755128275
                        DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskp 75 
                                   g gr++  +E+E++k+RER+RRa++ +i+aGLR++Gny l++raD+neV++AL+reAGwvv +DGtt++ +   
  Zpz_sc01203.1.g00080.1.am.mk  55 GVGRRRAREEKERTKLRERQRRAVTGRILAGLRQHGNYSLRARADINEVIAALAREAGWVVLPDGTTFPSSAAA 128
                                   7799****************************************************************976554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.7E-3456129IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MGVKDEEGED EDDEEEDDYF VDDDAAAGPG RYLLQASPVA VAPPPAAGAG SPAGGVGRRR  60
AREEKERTKL RERQRRAVTG RILAGLRQHG NYSLRARADI NEVIAALARE AGWVVLPDGT  120
TFPSSAAAAS QVCSFPLSPA LPDQLETGHG RHWQVSERKR EKGKSEQAFG WLVRRSRLPR  180
TRSATTARDR RRLLPGLSLR IRSLTT
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01203.1.g00080.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0639007e-71BT063900.1 Zea mays full-length cDNA clone ZM_BFc0118E07 mRNA, complete cds.
GenBankBT0848297e-71BT084829.2 Zea mays full-length cDNA clone ZM_BFb0189B17 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB6U7M65e-38B6U7M6_MAIZE; Uncharacterized protein
STRINGOGLUM09G20880.18e-33(Oryza glumipatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1969568
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.16e-31beta-amylase 7